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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Justin Vanderlip | 11th | Tied for 13th | 14th | |
| First Basemen | Aaron Scott | 11th | Eric Davis | Tied for 1st | 4th |
| Second Basemen | Alex Mendoza | 5th | Danny Valentin | Tied for 6th | 8th |
| Third Basemen | Roberto Herrera | 9th | Tied for 13th | 14th | |
| Shortstops | C.J. Bisbing | 2nd | Vic Vega | 8th | 8th |
| Left Fielders | Sam Webster | 12th | Trace Lindstrom | Tied for 1st | 4th |
| Center Fielders | Luis Vasquez | 3rd | Tied for 13th | 12th | |
| Right Fielders | Greg Flynn | 10th | Greg Flynn | Tied for 1st | 5th |
| Starting Pitchers | Alejandro Frias | 9th | Shane Bowers | 1st | 1st |
| Relievers | Shane Bowers | 7th | Shane Bowers | Tied for 3rd | 6th |
| Closers | Shane Bowers | 10th | Shane Bowers | Tied for 6th | 9th |
