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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Josh Hughes | 4th | Alex Vazquez | 2nd | 4th |
| First Basemen | Bill Lamas | 3rd | Tied for 3rd | 4th | |
| Second Basemen | Ricky Rosario | 3rd | Tied for 5th | 4th | |
| Third Basemen | Lionnel Lucantoni | 2nd | Alex Cordero | 2nd | 2nd |
| Shortstops | Nick Downing | 2nd | Tied for 1st | 2nd | |
| Left Fielders | Marcos Nunez | 2nd | Tied for 3rd | 3rd | |
| Center Fielders | Jason Trainor | 1st | Tied for 5th | 5th | |
| Right Fielders | Chang-sik Pak | 2nd | Juan Castillo | 1st | 1st |
| Starting Pitchers | Josh Simpson | 2nd | Chris Marcy | 4th | 2nd |
| Relievers | Luis Diaz | 1st | Alex Ruelas | 1st | 1st |
| Closers | Luis Diaz | 3rd | Chris Marcy | 1st | 1st |
